UCSC Genome Browser on D. melanogaster Aug. 2014 (BDGP Release 6 + ISO1 MT/dm6)
Move Zoom in Zoom out
chr2L:10,915,365-11,135,492 220,128 bp.
  
-   Hub: insulators track hub No Info  
chipseq insulators track hub
mapping insulators track hub
-   Hub: modENCODE data
Couldn't open https://hpc.nih.gov/~liuc22/modencode/modencode-hub.hub.txt
-   Hub:
Response is missing required header Content-Length: for url http://genome.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://hpc.nih.gov/~dalerr/lei/rnaseq/dahong-shep-brain-rnaseq/dahong-shep-brain-rnaseq.hub.txt&db=dm6 Couldn't open http://genome.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://hpc.nih.gov/~dalerr/lei/rnaseq/dahong-shep-brain-rnaseq/dahong-shep-brain-rnaseq.hub.txt&db=dm6
-   Hub: brain-chipseq-dm6 track hub No Info  
chipseq brain-chipseq-dm6 track hub
mapping brain-chipseq-dm6 track hub
-   Hub: dahong-shep-brain-rnaseq track hub No Info  
mapping dahong-shep-brain-rnaseq track hub
rnaseq dahong-shep-brain-rnaseq track hub
-   Hub: Track Collections No Info  
APF82h_FACS_RNAseq_UUU_NoDup
FourC_dsGFP
FourC_dsShep
APF82h_ATAC_dicer_100
APF82h_ATAC_UUU_100
APF82h_ATAC_dicer_150bp
APF82h_ATAC_UUU_150bp
larval_dicer_ATAC_150
larval_UUU_ATAC_150
APF18h_dicer_ATAC_150bp
APF18h_UUU_ATAC_150bp
APF48h_dicer_ATAC_150bp
APF48h_UUU_ATAC_150bp
-   Custom Tracks
18h_vs_48h_closing
18h_vs_48h_opening
48h_vs_82h_closing
48h_vs_82h_opening
82h_ATAC_dicer1_150bp_q0.1
82h_ATAC_FDR0.1_150bp_down
82h_ATAC_FDR0.1_150bp_up
82h_ATAC_q0.1PE_FDR0.1_up
82h_dicer1_PEq0.1
82h_rerun_dicer1_PEq0.1_peaks
82h_vs_larva_q0.1PE_FDR0.1_up
all_tads
intergenic
larva_vs_82h_opening
larval_vs_18h_closing
larval_vs_18h_opening
larval_vs_82h_closing
tad_active
tad_borders
tad_inactive
tad_PcG
82h_ATAC_dicer2_150bp_q0.1
82h_ATAC_q0.1PE_FDR0.1_down
82h_dicer2_PEq0.1
82h_rerun_dicer2_PEq0.1_peaks
82h_vs_larva_q0.1PE_FDR0.1_down
82h_ATAC_dicer3_150bp_q0.1
82h_dicer3_PEq0.1
82h_rerun_dicer3_PEq0.1_peaks
82h_ATAC_UUU1_150bp_q0.1
82h_rerun_UUU1_PEq0.1_peaks
82h_UUU1_PEq0.1
82h_ATAC_UUU2_150bp_q0.1
82h_rerun_UUU2_PEq0.1_peaks
82h_UUU2_PEq0.1
82h_ATAC_UUU3_150bp_q0.1
82h_rerun_UUU3_PEq0.1_peaks
82h_UUU3_PEq0.1
-   Mapping and Sequencing
Base Position
Chromosome Band
Assembly
Gap
GC Percent
INSDC
RefSeq Acc
Restr Enzymes
Short Match
Blat Sequence
-   Genes and Gene Predictions
NCBI RefSeq
AUGUSTUS
CRISPR
Ensembl Genes
Genscan Genes
Other RefSeq
Pfam in RefSeq
UniProt
-   mRNA and EST
Spliced ESTs
D. melanogaster ESTs
D. melanogaster mRNAs
Other mRNAs
-   Expression and Regulation
CpG Islands
ORegAnno
ReMap ChIP-seq
-   Comparative Genomics
Conservation
Cons 124 Insects
Insects Chain/Net
-   Variation and Repeats
new EVA SNP
Interrupted Rpts
Microsatellite
Simple Repeats
UniProt Variants
WM + SDust
RepeatMasker
Invisible link