Manage Custom Tracks
 
Genome: Mouse    Assembly: Dec. 2011 (GRCm38/mm10)    [mm10]
Name Description Type Doc Items Pos
CREsCREs of the embryonic mouse cerebellumbed 197299chr11:
CRE_interact_scCRE_interact_scinteract 197299chr11:
CRE_interact_cellTypeCRE_interact_cellTypeinteract 197299chr11:
CREs_cellTypeCREs_cellTypebed 197299chr11:
C3.Tlx3C3.Tlx3bigWig    
C4.OtpC4.OtpbigWig    
CN.gabaCN.gababigWig    
GABA.PreGABA.PrebigWig    
GABA.ProGABA.ProbigWig    
GCGCbigWig    
GCPGCPbigWig    
ININbigWig    
INeINebigWig    
IsthIsthbigWig    
Mes.Isl1Mes.Isl1bigWig    
MesMesbigWig    
MicrogliaMicrogliabigWig    
NPCNPCbigWig    
NPCaNPCabigWig    
NPCeNPCebigWig    
PC.CckPC.CckbigWig    
PC.En1PC.En1bigWig    
PC.Etv1PC.Etv1bigWig    
PC.Foxp1PC.Foxp1bigWig    
PC.NrgnPC.NrgnbigWig    
PTZPTZbigWig    
PericytePericytebigWig    
VECAVECAbigWig    
X1X1bigWig    
lCNlCNbigWig    
mCNmCNbigWig    
Validate enhancersValidated enhancersbed 23chr6:
check all / clear all 

Managing Custom Tracks
 

This section provides a brief description of the columns in custom track management table. For more details about managing custom tracks, see the Genome Browser User's Guide.

  • Name - a hyperlink to the update page where you can edit your track data.
  • Description - the value of the "description" attribute from the track line, if present. If no description is included in the input file, this field contains the track name.
  • Type - the track type, determined by the Browser based on the format of the data.
  • Doc - displays "Y" (Yes) if a description page has been uploaded for the track; otherwise the field is blank.
  • Items - the number of data items in the custom track file. An item count is not displayed for tracks lacking individual items (e.g. wiggle format data).
  • Pos - the default chromosomal position defined by the track file in either the browser line "position" attribute or the first data line. Clicking this link opens the Genome Browser or Table Browser at the specified position (note: only the chromosome name is shown in this column). The Pos column remains blank if the track lacks individual items (e.g. wiggle format data) and the browser line "position" attribute hasn't been set.